PTM Viewer

AT3G23780.1

Arabidopsis thaliana [ath]

nuclear RNA polymerase D2A

No PTMs currently found

Gene Family: HOM05D000688

Other Names: DMS2,DEFECTIVE IN MERISTEM SILENCING 2,DRD2,NRPD2,NRPE2,OCP1,OVEREXPRESSOR OF CATIONIC PEROXIDASE 1; NRPD2A

Uniprot

Link out to other resources with this protein ID : TAIR | PeptideAtlas | ARAPORT | PhosPhAt

PTMs

There are no stored PTMs for this protein

Sequence

Length: 1172

MPDMDIDVKDLEEFEATTGEINLSELGEGFLQSFCKKAATSFFDKYGLISHQLNSYNYFIEHGLQNVFQSFGEMLVEPSFDVVKKKDNDWRYATVKFGEVTVEKPTFFSDDKELEFLPWHARLQNMTYSARIKVNVQVEVFKNTVVKSDKFKTGQDNYVEKKILDVKKQDILIGSIPVMVKSILCKTSEKGKENCKKGDCAFDQGGYFVIKGAEKVFIAQEQMCTKRLWISNSPWTVSFRSENKRNRFIVRLSENEKAEDYKRREKVLTVYFLSTEIPVWLLFFALGVSSDKEAMDLIAFDGDDASITNSLIASIHVADAVCEAFRCGNNALTYVEQQIKSTKFPPAESVDECLHLYLFPGLQSLKKKARFLGYMVKCLLNSYAGKRKCENRDSFRNKRIELAGELLEREIRVHLAHARRKMTRAMQKHLSGDGDLKPIEHYLDASVITNGLSRAFSTGAWSHPFRKMERVSGVVANLGRANPLQTLIDLRRTRQQVLYTGKVGDARYPHPSHWGRVCFLSTPDGENCGLVKNMSLLGLVSTQSLESVVEKLFACGMEELMDDTCTPLFGKHKVLLNGDWVGLCADSESFVAELKSRRRQSELPREMEIKRDKDDNEVRIFTDAGRLLRPLLVVENLQKLKQEKPSQYPFDHLLDHGILELIGIEEEEDCNTAWGIKQLLKEPKIYTHCELDLSFLLGVSCAVVPFANHDHGRRVLYQSQKHCQQAIGFSSTNPNIRCDTLSQQLFYPQKPLFKTLASECLKKEVLFNGQNAIVAVNVHLGYNQEDSIVMNKASLERGMFRSEQIRSYKAEVDAKDSEKRKKMDELVQFGKTHSKIGKVDSLEDDGFPFIGANMSTGDIVIGRCTESGADHSIKLKHTERGIVQKVVLSSNDEGKNFAAVSLRQVRSPCLGDKFSSMHGQKGVLGYLEEQQNFPFTIQGIVPDIVINPHAFPSRQTPGQLLEAALSKGIACPIQKEGSSAAYTKLTRHATPFSTPGVTEITEQLHRAGFSRWGNERVYNGRSGEMMRSMIFMGPTFYQRLVHMSEDKVKFRNTGPVHPLTRQPVADRKRFGGIKFGEMERDCLIAHGASANLHERLFTLSDSSQMHICRKCKTYANVIERTPSSGRKIRGPYCRVCVSSDHVVRVYVPYGAKLLCQELFSMGITLNFDTKLC

Domains & Sites

Clear highlighted range

**Interpro Domains**
IPR ID	Description	From	To
IPR007120	DNA-directed RNA polymerase, subunit 2, hybrid-binding domain	702	1069
IPR007641	RNA polymerase Rpb2, domain 7	1071	1169
IPR007642	RNA polymerase Rpb2, domain 2	256	401
IPR007644	RNA polymerase, beta subunit, protrusion	47	435
IPR007645	RNA polymerase Rpb2, domain 3	478	537
IPR007646	RNA polymerase Rpb2, domain 4	574	635

**Sites**
Type	Description	Position
Active Site	ligand shared with RPB1	786
Active Site	ChEBI:CHEBI:29105	1108
Active Site	ChEBI:CHEBI:29105	1111
Active Site	ChEBI:CHEBI:29105	1133
Active Site	ChEBI:CHEBI:29105	1136

AT3G23780.1

Arabidopsis thaliana [ath]

nuclear RNA polymerase D2A

No PTMs currently found

PLAZA: AT3G23780

Gene Family: HOM05D000688

Other Names: DMS2,DEFECTIVE IN MERISTEM SILENCING 2,DRD2,NRPD2,NRPE2,OCP1,OVEREXPRESSOR OF CATIONIC PEROXIDASE 1; NRPD2A

Uniprot

A0A178VA17

Q9LK40

Link out to other resources with this protein ID : TAIR | PeptideAtlas | ARAPORT | PhosPhAt

PTMs

Sequence

Length: 1172

Domains & Sites

BLAST

Perform a BLAST search for this sequence, or a part of this sequence (minimum 50 characters)
A downloadable tutorial can be found here

AT3G23780.1

Arabidopsis thaliana [ath]

nuclear RNA polymerase D2A

No PTMs currently found

PLAZA: AT3G23780

Gene Family: HOM05D000688

Other Names: DMS2,DEFECTIVE IN MERISTEM SILENCING 2,DRD2,NRPD2,NRPE2,OCP1,OVEREXPRESSOR OF CATIONIC PEROXIDASE 1; NRPD2A

Uniprot

A0A178VA17

Q9LK40

Link out to other resources with this protein ID : TAIR | PeptideAtlas | ARAPORT | PhosPhAt

PTMs

Sequence

Length: 1172

Domains & Sites

BLAST

Perform a BLAST search for this sequence, or a part of this sequence (minimum 50 characters)A downloadable tutorial can be found here

Perform a BLAST search for this sequence, or a part of this sequence (minimum 50 characters)
A downloadable tutorial can be found here